MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,120
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 2,180
Total number of protein coding genes annotated/found:
2,120
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 107 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5022|JADGKV010000003.1
SEQF5022_01110
Genome Viewer
NA
AA
870/290
20378-21247
Phosphatidylserine decarboxylase proenzyme
SEQF5022|JADGKV010000003.1
SEQF5022_01111
Genome Viewer
NA
AA
624/208
21268-21891
FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase
SEQF5022|JADGKV010000003.1
SEQF5022_01112
Genome Viewer
NA
AA
1029/343
23190-22162
Fe(3+) ions import ATP-binding protein FbpC 2
SEQF5022|JADGKV010000003.1
SEQF5022_01113
Genome Viewer
NA
AA
1650/550
24840-23191
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01114
Genome Viewer
NA
AA
1017/339
26039-25023
Iron uptake protein A1
SEQF5022|JADGKV010000003.1
SEQF5022_01115
Genome Viewer
NA
AA
1266/422
27541-26276
Serine hydroxymethyltransferase
SEQF5022|JADGKV010000003.1
SEQF5022_01116
Genome Viewer
NA
AA
1290/430
28963-27674
Phosphoribosylamine--glycine ligase
SEQF5022|JADGKV010000003.1
SEQF5022_01117
Genome Viewer
NA
AA
1599/533
31136-29538
Bifunctional purine biosynthesis protein PurH
SEQF5022|JADGKV010000003.1
SEQF5022_01118
Genome Viewer
NA
AA
402/134
31725-31324
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01119
Genome Viewer
NA
AA
1737/579
33574-31838
Thiol:disulfide interchange protein DsbD
SEQF5022|JADGKV010000003.1
SEQF5022_01120
Genome Viewer
NA
AA
714/238
33757-34470
Aerobic respiration control protein ArcA
SEQF5022|JADGKV010000003.1
SEQF5022_01121
Genome Viewer
NA
AA
1101/367
35729-34629
Glutamate 5-kinase
SEQF5022|JADGKV010000003.1
SEQF5022_01122
Genome Viewer
NA
AA
483/161
35849-36331
Dihydrofolate reductase
SEQF5022|JADGKV010000003.1
SEQF5022_01123
Genome Viewer
NA
AA
2358/786
36356-38713
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01124
Genome Viewer
NA
AA
1005/335
38750-39754
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01125
Genome Viewer
NA
AA
1281/427
39843-41123
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01126
Genome Viewer
NA
AA
3024/1008
41243-44266
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01127
Genome Viewer
NA
AA
2571/857
46894-44324
Chaperone protein ClpB
SEQF5022|JADGKV010000003.1
SEQF5022_01128
Genome Viewer
NA
AA
567/189
47599-47033
5-formyltetrahydrofolate cyclo-ligase
SEQF5022|JADGKV010000003.1
SEQF5022_01129
Genome Viewer
NA
AA
378/126
48274-47897
Cell division protein ZapA
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 107 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
